Browse of TCMCG009C20653 protein

CDS

Accession Number	TCMCG009C20653
gbkey	CDS
Protein Id	XP_030510593.1
Location	join(77370751..77370774,77371175..77371248,77371337..77371476,77371593..77371679,77371854..77371941,77372026..77372106,77372301..77372378,77372464..77372543,77372709..77372787,77372884..77373213,77373898..77373957,77374184..77374427,77375336..77375605,77376124..77377494,77377631..77377883,77377997..77378129,77378346..77378433,77378527..77378605,77378995..77379290,77379651..77380713,77380834..77381211,77381430..77382049)
Gene	LOC115725279
GeneID	115725279
Organism	Cannabis sativa

Protein

Length	1971aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA560384
db_source	XM_030654733.1
Definition	mediator of RNA polymerase II transcription subunit 13 [Cannabis sativa]

EGGNOG-MAPPER Annotation

COG_category	K
Description	Component of the Mediator complex, a coactivator involved in regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko00001        [VIEW IN KEGG] ko03021        [VIEW IN KEGG]
KEGG_ko	ko:K15164        [VIEW IN KEGG]
EC	-
KEGG_Pathway	ko04919        [VIEW IN KEGG] map04919        [VIEW IN KEGG]
GOs	GO:0003674        [VIEW IN EMBL-EBI] GO:0005215        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0006810        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008643        [VIEW IN EMBL-EBI] GO:0015144        [VIEW IN EMBL-EBI] GO:0016020        [VIEW IN EMBL-EBI] GO:0016021        [VIEW IN EMBL-EBI] GO:0022857        [VIEW IN EMBL-EBI] GO:0031224        [VIEW IN EMBL-EBI] GO:0034219        [VIEW IN EMBL-EBI] GO:0040034        [VIEW IN EMBL-EBI] GO:0044425        [VIEW IN EMBL-EBI] GO:0050789        [VIEW IN EMBL-EBI] GO:0050793        [VIEW IN EMBL-EBI] GO:0051119        [VIEW IN EMBL-EBI] GO:0051179        [VIEW IN EMBL-EBI] GO:0051234        [VIEW IN EMBL-EBI] GO:0051239        [VIEW IN EMBL-EBI] GO:0055085        [VIEW IN EMBL-EBI] GO:0065007        [VIEW IN EMBL-EBI] GO:0071702        [VIEW IN EMBL-EBI] GO:0090213        [VIEW IN EMBL-EBI] GO:2000026        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGTTGACTAATGTTTTCAAAATCGGAGGTCTTCATCAAGTTTCATGGTTCCAGTTTCTTCCCCATGAATCAGATTGGATCTCTATACCCGATAAAAGTTTGAAAGTGGAGCAGAAAGATGCTGCTACGATGCTTGTGCTTTCATCACATCTGCAGTTGCAGAAGGAAGGATTTCTCAGCACTTGGACCAATTCCTTTGTTGGACCCTGGGATCCATCTCAGGGTTTGCACAATCCTGATGAGAAAATCAAGTTGTGGCTTTTTCTTCCTGGACATCATTCTTCTGTCATTGAGTCTGCTCAAGCTGCTGTATCTCGACTAAGAGTTGTTAAATCTGGGGTTTGGTTGGCTCCTGGAGACTCTGAAGAGGTTGCCACTGCTCTTTCACAGGCTTTAAGGAATTGTATAGAAAGAGCACTTTATGGACTCTCCTATATGAGGTACGGAGATGTGTTCTCAAAGTTCCGTCCATCTCAAAGCGAAGAAACATTCAGAAGAGGGCAGCATACGGTTGAATTCATCTTTGCTGCAACGGAAGAGGGAATTTTTGTGCACGCTATTATATCCTCAAAGCATGTCCGTGCTCTTTCAAGTGGTGACATAGAGAGAGTGTCGAAGCAATCTTCTAATAATTCTAGTTACAAACTTCCAGTGATTGTTTCTCCTCATGGAATACGTGGCAGACTTACTGGATGTTGTTCTGATGATCTTGTAAAACAGTTATACTTAGGTTCCAACAAGTTTAAAGCTTCAAATGGTTTAGTTGGTCTTCCAAATCATGTTTCTCAAGGTTCTGGTTGCCAACTTGGGGGACAAAATTGTTATTTAGAAGTAACCCTTGGTTGCCATAGATCAGAAGGTGACGGGCAAGGGAATTCAAACTCAAATTTCAACAAGAATACATCCCAGCATCATGTTGCTGAATCTTCTGCTTTGGGGAAAGTTGATCAAAAGGGAGTTGTAGATAATTTATCAGTGTACGAGAAAACATTTCTATATCCACCTGAAGCCGTGTTTGTTCCTGTATTGCAAAAATCATTTACAAGATCTTCTCTTAAAAGATTTTGGCTGCAGAATTGGATAGGACCCTCATTATCTGGCTCAGCTTTTTTTGTGCAATGTGCTGACGATGTAGATAGTTTAGAAGGATTGAATGAAATCAATAATAAACGCTCACAGCATGGTTATAATAGTAGCAGCAACAGTAATAACAGCAGCATTAGTAGCTTAAGCAGCAGCTCCAGTGATGGTGATTATAAGATGATCACTGGCACAAGTGAACTTGAGGCTGATGCTGATTCATTGACCTGTGGACAATCTGGTTTATCATCTAATGATCAAATGGATATGGATTTCCCCAAATTGGGTTCCAAGCGTTCACGACCAGGGATGACAGCTTCATACGGTCAAATGGGTGCAATTTCAAATTTTCCCATGCAAGATTCGTACAAGTCCGATCTTGGTCCTGGAGAAGTTAACAATTCAGTGGTTACAGGAGTTGGAAACGAGCAGATTGGATCTTATTGGGACTGGGATGATGACGATAGAGATGTGGGTACAGATATTCTAGCTCTTCTTCATGAGTTTGGAGATTTTGGCGACTTCTTCGAAAGTGATGCCTTACCTTTTGGAGAGCCCCCAGGAACTGCAGAATCGCAGGCTCTTATGTTCTCTGCACCAGATTGTGGTGATATACTCAGCAGTCCAGGTGGTATCATGGATGTTTCAGATCCATTGCTTTCCAATGAAGGTTTTACTTCCTTTGACAGCTTTAATCCACCTCAAGCAGTTAATGACGAGGTTCTCAGCAAAAATCAAGGGGTCATAAATAACTCCTCTTCATTTGGTTTAGTAAATCAATCCGCAGCATCTTCTACAATTTCCACCGAGTTTGATCATATTATAAAAGCTGAAGCTCTGATGACATTTGCCTCTGAATTTGGGGCAGTGGAAACTCCTTCAAGTGAGTTATCTTCATCCATCTTCAGAAGCCCATACTGTCCCAAATCTCGGAAAGTGGAAAGTTCAAGCTCAAGCTCAAACAATTATGTATATGGTGCAACACCGCCTAGTTCTCCTTGTTTTGATGGGGGTGATGAGAAGACTGGCACCCTCATAAATCCAAAAATTTGCAACAATTTAAAGCAAAATTCAAGTACTAATGTCCAGTCAAAGAACTGTTACACTGTTGTGGAGAGTGTGAAAGACCAAAACAACAGAAGATCTTGTAATAACAGCATTGTTGCATCTGATGGCGTGGCTGCTTCATCTTCAAATACCAGTTCCATAACTGCCACTAACTCTGCCCAGAGGAAGCTTCATGATAGCACATTTGATTCAGATAATCTATTTCTCTCTAAGAAAACCACGCTTGCAACTGAAATCGAGTGCCTTACGTTCCAAGCTTCCATGTGTAGGATTCGACATACCCTATTATCTTCAAGTAGCTCTACGTCAGTAGGTTTAAACAGGTTAAATTCAAACACTATTCTAAATCAGCTTCCTAGTGAACCAAGTATGATGACAGACAATTTATCTGGCAAATATGAGGTGAAGAAGAAAGAATCTATACCAATTAGAATAGCTGGTGATATTGATGGTAGGATGCTAGATGGGCATCTCAATGCTCCTGTTGGTGTTTGGCGCTCCGTTGGTGTTCCTAGGGTATCGAAACCAACAAATTCACCAAGTATGGAAATTAGCCAATCTTTGCCTCATAAGACCTTCAATGAGGAAGGTATTCTTTCTTATGGGCAAAGACAACCACTTCAAGAGCTTCTCGATGGTATGACATTACTTGTCCAACAAGCAACTTCCTTTGTCGATCTGGCTCTTGATGCAGAGTGTGGTGATGGACCTTATGGTTTGCTTGCATTACAAGAACAGTGGAGGAAGGGTTTTTCCTGTGGGCCTTCTATGGTTCATGCAGGCTGTGGGGGGACTTTGGCATCTTGTCATTCCTTGGACATTGCTGGAGTGGAGTTAATCGATCCACTTACTGCTGATGTATATGCTTCCTCGGTGGTTAGTCTGCTGCAGGCTGACATTAAATCAGCTTTAAAGTCTGCATTTGATGCTATGGATGGACCATTGTCTGTCACGGATTGGTGCAAAGGGCGAAACCAATCAGGTGAAGCAGGGAACACAGGTGATGGATATTCTGCTGAATCATCTCTTAATGAATCAAGTTCTGCAGTTGTTTCTATTGGGGAACCAATTAGCCCATCTCAGACTTCTAGTGGACAATCTAGCCTCAAAGACGGTGTGAAAATGGATGAGACATGCCAAAGGAGATTGAACCAAGAGAACTCTGGTTCTGAGGCAGATCTGTCAATTGGCTCTCGTCTTAGACCAACACTTTATATTGTTCCTTTGCCTTCTATACTTCTTGGGTATCAGGATGATTGGCTCAAAACATCGGCGAGTTCTCTACAGCTATGGGAAAAGGCTCCTTTCGAACCGTATGCCCTGCCCAAACCTATTAATTACTGTGTAGTATGCCCAAACATTGATCCCCTTACTTCTGCTGCTTCTGATTTTTTCCAACAATTGGCTACTGTTTATGAGACATGCAAACTAGGAACTCATTTACCTCAGAGTTTTGGGAATCAAATGGATGTAGATTATGGGAAATCTTCAAATTCTGGGTTTGTATTACTCGATTGCCCTCAAGCAATGAGGATAGAAAGTGGTAATGCTTCTCTTGTTGGCTCAATAAGTGATTATTTTCTCTCTCTTTCCAATGGTTGGGACTTAACAAGTTATCTCAAGTCTCTCTCAAAGGCTCTTAAAGCTTTGAAGCTTGGTCCTTGCATATCCACAAATGCGAAAGAAGGAAGTAGTACTTCATGTATGGTAATATATGTGGTATGCCCATTCCCCGAGCCTACAGCCGTTCTACAAACTGTTGTTGAATCTGCTGTTGCTCTTGGTTCGGTTGTTTTCCAGTCAGACCGAGAAAGGAGATCTGTGCTGCACAATCAGGTTGCCAAGGCATTAAGCGGTTCTGCAGCTGTTGATGAGGCGTCAATATCAAATGTATTAGTGCTTTCAGGCTTTAGTATTCCGAAATTGGTACTGCAGATTGTTACGGTTGATGCCATTTTCAGAGTTACAAGTCCATCACTTAGTGAACTTGCAACTCTCAAGGAGATTGCTTTCACTGTTTACAACAAGGCTCGTCGAATGTCACGAGGATCCTCTAATGATGTCATCCAGTCATCATCATTCTCCACTAGGCCTCATTCGGTCTTATCACAAATGACTTCCCACACTCCTGGAATGTGGAAGGATTGCATAGGTCCTCGAATGACAGGGCATTCCCTGCCAAGAGAGGGTGAAATTGATTCTAGCTTGAGGTCGGGTGCCTGGGATAATTCATGGCAAACAAGAGGTGGATCAATAGCCTGCGATCCAAACAGAATGGGTGATTACTTTCCTCATGATGAAATCCGTTACATGTTTGAGCCACTTTTCATCCTCGCCGAAGCCGGCTCCTTAGAAAATGGGTATACACCTTTTAGTTCCAGTAATTCAGCCTCGGAATCTTCAAAATCTTTGTTGGACGATAGCAGCGGAAGCTATATGCAGGGTGATACTGCCTCGAACTCTCACATCGATGGATCTGATATGGGTAAGACTTCTCCAAGCTTGCACTGTTGCTATGGTTGGACCGAGGATTGGCGTTGGCTGGTATGCATTTGGACTGATGCTAGAGGTGAATTGCTTGATAGCCAGATATTCCCCTTCGGTGGAATTAGCAGTAGGCAAGACACAAAAGGTCTAGAGTGCCTTTTTGTTCAAGTTTTACAACAAGGCTGTCATATACTTCAAGCTTGCTCTTCCGATTCCGGTGTTGTGAGACCCAGAGATTTTGTGATTGCCCGCATCGGAAGTTTCTACGAGCTTGAATATCAAGAGTGGCAGAAAGCCATCAATTCGGTTGGGGGTTCTGAGGTGAAAAAATGGCCTTTGCAATTGCGTCGATCTGTGTCAGATGGGATCCCTGCAAACAGTAATGGAACTTCCTTGCAGCAGCAGGAGATGGGTTTGATTCAAGAGAGAAATCTACCTTCTTCACCAAGCCCACTATACGGTAGCCCTCACCCAAAAGCTTCGAGCTTTATGAAAGGCGGTTTAGGAGGTCAAACTGCAGCAAGAAAGCACATTATGAGTGGACACACAGTGATTGACAATTCAAAGGGTCTGCTTCAGTGGGTGCAAAGCATCACCTTTGTTACTATTTCGATCGATCATTCTTTACATCTTGTTTCACAAGCAGATTCACCATCTCCTGGAGCAACACAAGGCAGTGGTCTACATACGGGGTCCTCGGGATATCTGGAAGGATTCACCCCAGTGAAATCTCTCGGCTCTACATCCGCATCTTACATTTTAATCCCATCACCGAGCATGCGTTTCCTCTCTCCAACACCACTTCAGCTTCCCACATGCCTCACAGCTGAATCCCCTCCACTCGCTCATTTACTTCACAGTAAAGGCTCTGCGATCCCTCTCTCCACTGGTTTCGTTGTTTCAAAAGCCGTACCATCTATGAGAAAAGATAGTAAGCACAACTTAAAAGAGGAATGGCCTTCAGCTCTCTCAATCAGTCTCATTGATCATTACGGCGGAAACAGCTTTAATCAAGATAAAATCACCAGAGGTCCTATAAAACAAGGGAGAAGGAGTTCAAATTCAGATCCAAAAGAATTTGAAACCGAAACACACTTAATTCTCGAGTCTGTTGCTGCAGAGTTACAAGCACTTTCATGGATGACTGTAAGCCCGTCTTACTTAGAACGACGAACAGCTTTGCCTTTTCATTGTGATATGGTTTTGAGACTTAGAAGACTTCTTCATTTCGCCGATAAGGAGCTTTCTCGACATTTAGAGAAGTCACAAACTGGAGGGTAG

Protein:   MLTNVFKIGGLHQVSWFQFLPHESDWISIPDKSLKVEQKDAATMLVLSSHLQLQKEGFLSTWTNSFVGPWDPSQGLHNPDEKIKLWLFLPGHHSSVIESAQAAVSRLRVVKSGVWLAPGDSEEVATALSQALRNCIERALYGLSYMRYGDVFSKFRPSQSEETFRRGQHTVEFIFAATEEGIFVHAIISSKHVRALSSGDIERVSKQSSNNSSYKLPVIVSPHGIRGRLTGCCSDDLVKQLYLGSNKFKASNGLVGLPNHVSQGSGCQLGGQNCYLEVTLGCHRSEGDGQGNSNSNFNKNTSQHHVAESSALGKVDQKGVVDNLSVYEKTFLYPPEAVFVPVLQKSFTRSSLKRFWLQNWIGPSLSGSAFFVQCADDVDSLEGLNEINNKRSQHGYNSSSNSNNSSISSLSSSSSDGDYKMITGTSELEADADSLTCGQSGLSSNDQMDMDFPKLGSKRSRPGMTASYGQMGAISNFPMQDSYKSDLGPGEVNNSVVTGVGNEQIGSYWDWDDDDRDVGTDILALLHEFGDFGDFFESDALPFGEPPGTAESQALMFSAPDCGDILSSPGGIMDVSDPLLSNEGFTSFDSFNPPQAVNDEVLSKNQGVINNSSSFGLVNQSAASSTISTEFDHIIKAEALMTFASEFGAVETPSSELSSSIFRSPYCPKSRKVESSSSSSNNYVYGATPPSSPCFDGGDEKTGTLINPKICNNLKQNSSTNVQSKNCYTVVESVKDQNNRRSCNNSIVASDGVAASSSNTSSITATNSAQRKLHDSTFDSDNLFLSKKTTLATEIECLTFQASMCRIRHTLLSSSSSTSVGLNRLNSNTILNQLPSEPSMMTDNLSGKYEVKKKESIPIRIAGDIDGRMLDGHLNAPVGVWRSVGVPRVSKPTNSPSMEISQSLPHKTFNEEGILSYGQRQPLQELLDGMTLLVQQATSFVDLALDAECGDGPYGLLALQEQWRKGFSCGPSMVHAGCGGTLASCHSLDIAGVELIDPLTADVYASSVVSLLQADIKSALKSAFDAMDGPLSVTDWCKGRNQSGEAGNTGDGYSAESSLNESSSAVVSIGEPISPSQTSSGQSSLKDGVKMDETCQRRLNQENSGSEADLSIGSRLRPTLYIVPLPSILLGYQDDWLKTSASSLQLWEKAPFEPYALPKPINYCVVCPNIDPLTSAASDFFQQLATVYETCKLGTHLPQSFGNQMDVDYGKSSNSGFVLLDCPQAMRIESGNASLVGSISDYFLSLSNGWDLTSYLKSLSKALKALKLGPCISTNAKEGSSTSCMVIYVVCPFPEPTAVLQTVVESAVALGSVVFQSDRERRSVLHNQVAKALSGSAAVDEASISNVLVLSGFSIPKLVLQIVTVDAIFRVTSPSLSELATLKEIAFTVYNKARRMSRGSSNDVIQSSSFSTRPHSVLSQMTSHTPGMWKDCIGPRMTGHSLPREGEIDSSLRSGAWDNSWQTRGGSIACDPNRMGDYFPHDEIRYMFEPLFILAEAGSLENGYTPFSSSNSASESSKSLLDDSSGSYMQGDTASNSHIDGSDMGKTSPSLHCCYGWTEDWRWLVCIWTDARGELLDSQIFPFGGISSRQDTKGLECLFVQVLQQGCHILQACSSDSGVVRPRDFVIARIGSFYELEYQEWQKAINSVGGSEVKKWPLQLRRSVSDGIPANSNGTSLQQQEMGLIQERNLPSSPSPLYGSPHPKASSFMKGGLGGQTAARKHIMSGHTVIDNSKGLLQWVQSITFVTISIDHSLHLVSQADSPSPGATQGSGLHTGSSGYLEGFTPVKSLGSTSASYILIPSPSMRFLSPTPLQLPTCLTAESPPLAHLLHSKGSAIPLSTGFVVSKAVPSMRKDSKHNLKEEWPSALSISLIDHYGGNSFNQDKITRGPIKQGRRSSNSDPKEFETETHLILESVAAELQALSWMTVSPSYLERRTALPFHCDMVLRLRRLLHFADKELSRHLEKSQTGG